Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LIMK1P53667 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIMK1P53667 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LIMK1P53667 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 AL645937.2-201ENST00000396808 931 ntBASIC14.93□□□□□ -0.02
LIMK1P53667 AL136309.1-201ENST00000403917 691 ntBASIC14.93□□□□□ -0.02
LIMK1P53667 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 AC125604.1-201ENST00000496255 707 ntBASIC14.93□□□□□ -0.02
LIMK1P53667 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.93□□□□□ -0.02
LIMK1P53667 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.93□□□□□ -0.02
LIMK1P53667 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LIMK1P53667 AC103988.2-201ENST00000561804 725 ntBASIC14.93□□□□□ -0.02
LIMK1P53667 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 OR10B1P-201ENST00000601666 907 ntBASIC14.93□□□□□ -0.02
LIMK1P53667 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LIMK1P53667 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIMK1P53667 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIMK1P53667 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.93□□□□□ -0.02
LIMK1P53667 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LIMK1P53667 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.93□□□□□ -0.02
LIMK1P53667 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 LINC02447-202ENST00000501888 2146 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.92□□□□□ -0.02
LIMK1P53667 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 PDIA3P2-201ENST00000428073 158 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.92□□□□□ -0.02
LIMK1P53667 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.92□□□□□ -0.02
LIMK1P53667 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 AC242376.1-201ENST00000559033 726 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 AC087045.2-201ENST00000606279 1003 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 AL805961.1-201ENST00000642026 753 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LIMK1P53667 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 KRT8P4-201ENST00000509735 1454 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 AC134407.2-201ENST00000625089 1978 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK1P53667 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 TCAF2P1-201ENST00000291129 2421 ntBASIC14.92□□□□□ -0.02
LIMK1P53667 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK1P53667 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK1P53667 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms