Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNA4P52798 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNA4P52798 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNA4P52798 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNA4P52798 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNA4P52798 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNA4P52798 RN7SKP175-201ENST00000408472 289 ntBASIC12.66□□□□□ -0.38
EFNA4P52798 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.66□□□□□ -0.38
EFNA4P52798 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 AC016700.1-201ENST00000429424 312 ntBASIC12.66□□□□□ -0.38
EFNA4P52798 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.66□□□□□ -0.38
EFNA4P52798 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 RHOQP1-201ENST00000555758 579 ntBASIC12.66□□□□□ -0.38
EFNA4P52798 MIR4683-201ENST00000579659 81 ntBASIC12.66□□□□□ -0.38
EFNA4P52798 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.66□□□□□ -0.38
EFNA4P52798 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.66□□□□□ -0.38
EFNA4P52798 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
EFNA4P52798 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNA4P52798 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 AC132872.4-202ENST00000622924 2756 ntBASIC12.66□□□□□ -0.38
EFNA4P52798 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
EFNA4P52798 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNA4P52798 AC026691.1-201ENST00000602502 2017 ntBASIC12.66□□□□□ -0.38
EFNA4P52798 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNA4P52798 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNA4P52798 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.65□□□□□ -0.38
EFNA4P52798 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.65□□□□□ -0.38
EFNA4P52798 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.65□□□□□ -0.38
EFNA4P52798 AC011742.3-201ENST00000439053 820 ntBASIC12.65□□□□□ -0.38
EFNA4P52798 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNA4P52798 AC100827.2-201ENST00000563214 1194 ntBASIC12.65□□□□□ -0.38
EFNA4P52798 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 RN7SL163P-201ENST00000583100 276 ntBASIC12.65□□□□□ -0.38
EFNA4P52798 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.65□□□□□ -0.38
EFNA4P52798 AC138696.2-201ENST00000607376 223 ntBASIC12.65□□□□□ -0.38
EFNA4P52798 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 AC100757.4-201ENST00000626934 759 ntBASIC12.65□□□□□ -0.38
EFNA4P52798 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 AC092850.2-201ENST00000623821 2697 ntBASIC12.65□□□□□ -0.38
EFNA4P52798 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNA4P52798 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNA4P52798 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms