Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.31□□□□□ -0.12
SMSP52788 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.31□□□□□ -0.12
SMSP52788 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.31□□□□□ -0.12
SMSP52788 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMSP52788 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.31□□□□□ -0.12
SMSP52788 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.31□□□□□ -0.12
SMSP52788 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.31□□□□□ -0.12
SMSP52788 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMSP52788 COX11-210ENST00000639671 696 ntBASIC14.31□□□□□ -0.12
SMSP52788 AL033527.5-201ENST00000641382 801 ntBASIC14.31□□□□□ -0.12
SMSP52788 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMSP52788 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMSP52788 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.31□□□□□ -0.12
SMSP52788 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMSP52788 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.31□□□□□ -0.12
SMSP52788 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMSP52788 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.31□□□□□ -0.12
SMSP52788 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.31□□□□□ -0.12
SMSP52788 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.31□□□□□ -0.12
SMSP52788 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 AL136982.4-201ENST00000437689 1740 ntBASIC14.3□□□□□ -0.12
SMSP52788 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SMSP52788 AC007191.1-201ENST00000623179 2995 ntBASIC14.3□□□□□ -0.12
SMSP52788 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.3□□□□□ -0.12
SMSP52788 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.3□□□□□ -0.12
SMSP52788 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.3□□□□□ -0.12
SMSP52788 AC092337.1-201ENST00000568699 1129 ntBASIC14.3□□□□□ -0.12
SMSP52788 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SMSP52788 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.3□□□□□ -0.12
SMSP52788 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SMSP52788 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SMSP52788 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMSP52788 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SMSP52788 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 AJ011931.1-201ENST00000618749 2492 ntBASIC14.29□□□□□ -0.12
SMSP52788 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.29□□□□□ -0.12
SMSP52788 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SMSP52788 FO393414.2-201ENST00000405153 598 ntBASIC14.29□□□□□ -0.12
SMSP52788 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SMSP52788 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms