Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.08■□□□□ 0.32
USP11P51784 FAM8A4P-201ENST00000435433 1213 ntBASIC17.08■□□□□ 0.32
USP11P51784 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.08■□□□□ 0.32
USP11P51784 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.08■□□□□ 0.32
USP11P51784 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
USP11P51784 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.08■□□□□ 0.32
USP11P51784 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
USP11P51784 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.08■□□□□ 0.32
USP11P51784 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.08■□□□□ 0.32
USP11P51784 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.08■□□□□ 0.32
USP11P51784 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.08■□□□□ 0.32
USP11P51784 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.08■□□□□ 0.32
USP11P51784 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.08■□□□□ 0.32
USP11P51784 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 AP000593.2-201ENST00000542775 1433 ntBASIC17.07■□□□□ 0.32
USP11P51784 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 FKBP4P6-201ENST00000457486 1332 ntBASIC17.07■□□□□ 0.32
USP11P51784 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 AC099336.1-201ENST00000417053 1171 ntBASIC17.07■□□□□ 0.32
USP11P51784 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.07■□□□□ 0.32
USP11P51784 AC106820.3-201ENST00000561653 397 ntBASIC17.07■□□□□ 0.32
USP11P51784 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
USP11P51784 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
USP11P51784 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP11P51784 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.06■□□□□ 0.32
USP11P51784 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 AC003102.2-201ENST00000589195 1469 ntBASIC17.06■□□□□ 0.32
USP11P51784 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP11P51784 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
USP11P51784 MIR1202-201ENST00000408529 83 ntBASIC17.06■□□□□ 0.32
USP11P51784 HLA-V-201ENST00000429037 534 ntBASIC17.06■□□□□ 0.32
USP11P51784 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 AC007969.1-201ENST00000433675 447 ntBASIC17.06■□□□□ 0.32
USP11P51784 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.06■□□□□ 0.32
USP11P51784 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.06■□□□□ 0.32
USP11P51784 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.06■□□□□ 0.32
USP11P51784 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.06■□□□□ 0.32
USP11P51784 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
USP11P51784 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.06■□□□□ 0.32
USP11P51784 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.06■□□□□ 0.32
USP11P51784 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.06■□□□□ 0.32
USP11P51784 AC138696.2-201ENST00000607376 223 ntBASIC17.06■□□□□ 0.32
USP11P51784 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
USP11P51784 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP11P51784 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP11P51784 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms