Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TUBP50607 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBP50607 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBP50607 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBP50607 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBP50607 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBP50607 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBP50607 SAMD11P1-201ENST00000571429 661 ntBASIC16.02■□□□□ 0.16
TUBP50607 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBP50607 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBP50607 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBP50607 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.02■□□□□ 0.15
TUBP50607 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBP50607 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBP50607 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBP50607 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBP50607 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TUBP50607 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBP50607 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.02■□□□□ 0.15
TUBP50607 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBP50607 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBP50607 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.02■□□□□ 0.15
TUBP50607 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TUBP50607 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBP50607 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TUBP50607 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TUBP50607 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TUBP50607 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.01■□□□□ 0.15
TUBP50607 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBP50607 AL139094.1-201ENST00000405549 1188 ntBASIC16.01■□□□□ 0.15
TUBP50607 CNN2P8-201ENST00000421872 913 ntBASIC16.01■□□□□ 0.15
TUBP50607 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBP50607 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBP50607 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TUBP50607 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TUBP50607 AC132938.4-201ENST00000623835 848 ntBASIC16.01■□□□□ 0.15
TUBP50607 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBP50607 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBP50607 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 AL138709.1-201ENST00000614840 1693 ntBASIC16.01■□□□□ 0.15
TUBP50607 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBP50607 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBP50607 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TUBP50607 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16■□□□□ 0.15
TUBP50607 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 AC112693.3-201ENST00000624819 1983 ntBASIC16■□□□□ 0.15
TUBP50607 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
TUBP50607 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16■□□□□ 0.15
TUBP50607 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16■□□□□ 0.15
TUBP50607 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16■□□□□ 0.15
TUBP50607 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16■□□□□ 0.15
TUBP50607 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16■□□□□ 0.15
TUBP50607 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 RHOXF1P1-202ENST00000635473 501 ntBASIC16■□□□□ 0.15
TUBP50607 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TUBP50607 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBP50607 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16■□□□□ 0.15
TUBP50607 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms