Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2CP42773 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDKN2CP42773 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2CP42773 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 KRT18P13-201ENST00000400056 1290 ntBASIC14.37□□□□□ -0.11
CDKN2CP42773 HLA-K-203ENST00000430151 1046 ntBASIC14.37□□□□□ -0.11
CDKN2CP42773 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN2CP42773 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN2CP42773 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN2CP42773 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDKN2CP42773 AC009407.1-201ENST00000568958 598 ntBASIC14.37□□□□□ -0.11
CDKN2CP42773 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 AL158211.3-201ENST00000607385 239 ntBASIC14.37□□□□□ -0.11
CDKN2CP42773 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 OR2I1P-210ENST00000642037 4691 ntBASIC14.37□□□□□ -0.11
CDKN2CP42773 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 AC015802.1-201ENST00000588104 1449 ntBASIC14.37□□□□□ -0.11
CDKN2CP42773 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 AL137783.1-201ENST00000623494 1896 ntBASIC14.37□□□□□ -0.11
CDKN2CP42773 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN2CP42773 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN2CP42773 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2CP42773 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2CP42773 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
CDKN2CP42773 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 AC023090.2-201ENST00000625182 2110 ntBASIC14.36□□□□□ -0.11
CDKN2CP42773 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN2CP42773 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.36□□□□□ -0.11
CDKN2CP42773 AC009477.1-201ENST00000452936 217 ntBASIC14.36□□□□□ -0.11
CDKN2CP42773 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.36□□□□□ -0.11
CDKN2CP42773 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.36□□□□□ -0.11
CDKN2CP42773 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKN2CP42773 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CDKN2CP42773 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.36□□□□□ -0.11
CDKN2CP42773 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.36□□□□□ -0.11
CDKN2CP42773 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKN2CP42773 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms