Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.43□□□□□ -0.42
CEACAM3P40198 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 COX20P2-201ENST00000452636 358 ntBASIC12.43□□□□□ -0.42
CEACAM3P40198 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.43□□□□□ -0.42
CEACAM3P40198 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.43□□□□□ -0.42
CEACAM3P40198 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
CEACAM3P40198 AP005019.2-201ENST00000615104 511 ntBASIC12.43□□□□□ -0.42
CEACAM3P40198 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.43□□□□□ -0.42
CEACAM3P40198 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 AL603764.1-201ENST00000636452 321 ntBASIC12.43□□□□□ -0.42
CEACAM3P40198 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.43□□□□□ -0.42
CEACAM3P40198 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 AC006486.2-201ENST00000624246 2199 ntBASIC12.42□□□□□ -0.42
CEACAM3P40198 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.42□□□□□ -0.42
CEACAM3P40198 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.42□□□□□ -0.42
CEACAM3P40198 KRT17P7-201ENST00000451704 1104 ntBASIC12.42□□□□□ -0.42
CEACAM3P40198 AC007389.4-201ENST00000454674 793 ntBASIC12.42□□□□□ -0.42
CEACAM3P40198 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CEACAM3P40198 PTP4A1P2-201ENST00000546033 454 ntBASIC12.42□□□□□ -0.42
CEACAM3P40198 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 WASH4P-201ENST00000564273 1246 ntBASIC12.42□□□□□ -0.42
CEACAM3P40198 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.42□□□□□ -0.42
CEACAM3P40198 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.42□□□□□ -0.42
CEACAM3P40198 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.42□□□□□ -0.42
CEACAM3P40198 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CEACAM3P40198 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CEACAM3P40198 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms