Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
COL15A1P39059 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 AC008825.2-201ENST00000603374 718 ntBASIC18.94■□□□□ 0.62
COL15A1P39059 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
COL15A1P39059 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL15A1P39059 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 TBC1D3J-201ENST00000620719 1426 ntBASIC18.94■□□□□ 0.62
COL15A1P39059 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.94■□□□□ 0.62
COL15A1P39059 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL15A1P39059 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
COL15A1P39059 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL15A1P39059 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL15A1P39059 AC098935.1-201ENST00000446057 611 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
COL15A1P39059 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.93■□□□□ 0.62
COL15A1P39059 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
COL15A1P39059 NPM1P43-201ENST00000558669 786 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.93■□□□□ 0.62
COL15A1P39059 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 AC103691.2-201ENST00000618824 433 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 AC011491.1-203ENST00000637688 543 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL15A1P39059 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.93■□□□□ 0.62
COL15A1P39059 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL15A1P39059 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL15A1P39059 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.93■□□□□ 0.62
COL15A1P39059 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.93■□□□□ 0.62
COL15A1P39059 MEG3_2.1-201ENST00000611456 105 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 MIR6720-201ENST00000611664 98 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 AL157813.1-201ENST00000612996 587 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 COX6A1P2-201ENST00000620597 330 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 YRDCP1-201ENST00000621419 643 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.93■□□□□ 0.62
COL15A1P39059 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL15A1P39059 LILRP1-201ENST00000444199 1370 ntBASIC18.93■□□□□ 0.62
COL15A1P39059 AL162727.3-201ENST00000635661 2787 ntBASIC18.92■□□□□ 0.62
COL15A1P39059 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.92■□□□□ 0.62
COL15A1P39059 AC003102.2-201ENST00000589195 1469 ntBASIC18.92■□□□□ 0.62
COL15A1P39059 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms