Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.58□□□□□ -0.4
SNCAP37840 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.58□□□□□ -0.4
SNCAP37840 CYP4F24P-201ENST00000586049 1580 ntBASIC12.58□□□□□ -0.4
SNCAP37840 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 AC140113.2-201ENST00000604370 208 ntBASIC12.58□□□□□ -0.4
SNCAP37840 AC026120.1-201ENST00000611536 926 ntBASIC12.58□□□□□ -0.4
SNCAP37840 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.58□□□□□ -0.4
SNCAP37840 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SNCAP37840 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SNCAP37840 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.58□□□□□ -0.4
SNCAP37840 MST1P2-201ENST00000457982 2291 ntBASIC12.58□□□□□ -0.4
SNCAP37840 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 UXT-AS1-201ENST00000590504 1525 ntBASIC12.57□□□□□ -0.4
SNCAP37840 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.57□□□□□ -0.4
SNCAP37840 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.57□□□□□ -0.4
SNCAP37840 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.57□□□□□ -0.4
SNCAP37840 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.57□□□□□ -0.4
SNCAP37840 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SNCAP37840 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.57□□□□□ -0.4
SNCAP37840 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SNCAP37840 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SNCAP37840 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.57□□□□□ -0.4
SNCAP37840 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SNCAP37840 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.56□□□□□ -0.4
SNCAP37840 AP000842.3-202ENST00000569238 1080 ntBASIC12.56□□□□□ -0.4
SNCAP37840 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.56□□□□□ -0.4
SNCAP37840 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 AC120114.3-201ENST00000611923 658 ntBASIC12.56□□□□□ -0.4
SNCAP37840 BX640515.1-201ENST00000617215 977 ntBASIC12.56□□□□□ -0.4
SNCAP37840 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms