Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT9P35527 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT9P35527 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT9P35527 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT9P35527 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT9P35527 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.66■□□□□ 0.26
KRT9P35527 AC138969.3-201ENST00000546612 1459 ntBASIC16.66■□□□□ 0.26
KRT9P35527 AC138932.2-201ENST00000548268 1459 ntBASIC16.66■□□□□ 0.26
KRT9P35527 AC126755.4-201ENST00000549796 1459 ntBASIC16.66■□□□□ 0.26
KRT9P35527 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KRT9P35527 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KRT9P35527 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT9P35527 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT9P35527 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT9P35527 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT9P35527 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT9P35527 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT9P35527 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 AL512638.1-201ENST00000457493 794 ntBASIC16.65■□□□□ 0.26
KRT9P35527 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT9P35527 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 TIMM17BP1-201ENST00000545713 516 ntBASIC16.65■□□□□ 0.26
KRT9P35527 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.65■□□□□ 0.26
KRT9P35527 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 ST20-AS1-201ENST00000560255 4223 ntBASIC16.65■□□□□ 0.26
KRT9P35527 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KRT9P35527 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KRT9P35527 AL121723.1-201ENST00000445194 1519 ntBASIC16.65■□□□□ 0.26
KRT9P35527 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT9P35527 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT9P35527 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT9P35527 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
KRT9P35527 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.64■□□□□ 0.26
KRT9P35527 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT9P35527 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
KRT9P35527 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.26
KRT9P35527 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.64■□□□□ 0.25
KRT9P35527 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KRT9P35527 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KRT9P35527 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT9P35527 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT9P35527 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KRT9P35527 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT9P35527 TSSK5P-201ENST00000423978 907 ntBASIC16.64■□□□□ 0.25
KRT9P35527 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT9P35527 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT9P35527 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT9P35527 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT9P35527 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT9P35527 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT9P35527 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT9P35527 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT9P35527 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT9P35527 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT9P35527 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
KRT9P35527 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT9P35527 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms