Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AP000845.1-201ENST00000581677 2131 ntBASIC20.8■□□□□ 0.92
CPS1P31327 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 AL139384.1-201ENST00000612143 3047 ntBASIC20.8■□□□□ 0.92
CPS1P31327 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 PTGER4P2-201ENST00000328411 252 ntBASIC20.8■□□□□ 0.92
CPS1P31327 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 KRT18P46-201ENST00000435568 1279 ntBASIC20.8■□□□□ 0.92
CPS1P31327 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.8■□□□□ 0.92
CPS1P31327 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 PTGER4P3-201ENST00000458150 252 ntBASIC20.8■□□□□ 0.92
CPS1P31327 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 CHCHD2P2-201ENST00000503744 321 ntBASIC20.8■□□□□ 0.92
CPS1P31327 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC20.8■□□□□ 0.92
CPS1P31327 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.8■□□□□ 0.92
CPS1P31327 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.8■□□□□ 0.92
CPS1P31327 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPS1P31327 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.8■□□□□ 0.92
CPS1P31327 KRT17P5-201ENST00000332088 839 ntBASIC20.79■□□□□ 0.92
CPS1P31327 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC20.79■□□□□ 0.92
CPS1P31327 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.79■□□□□ 0.92
CPS1P31327 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.79■□□□□ 0.92
CPS1P31327 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 AL353622.2-201ENST00000605846 425 ntBASIC20.79■□□□□ 0.92
CPS1P31327 AL022334.2-201ENST00000610000 484 ntBASIC20.79■□□□□ 0.92
CPS1P31327 BX088702.1-201ENST00000610784 235 ntBASIC20.79■□□□□ 0.92
CPS1P31327 AC009145.4-201ENST00000625119 1294 ntBASIC20.79■□□□□ 0.92
CPS1P31327 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.79■□□□□ 0.92
CPS1P31327 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CPS1P31327 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC20.79■□□□□ 0.92
CPS1P31327 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.79■□□□□ 0.92
CPS1P31327 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CPS1P31327 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPS1P31327 ACTG1P19-201ENST00000418987 1116 ntBASIC20.78■□□□□ 0.92
CPS1P31327 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CPS1P31327 AC063952.3-201ENST00000467756 308 ntBASIC20.78■□□□□ 0.92
CPS1P31327 RN7SL23P-201ENST00000484055 275 ntBASIC20.78■□□□□ 0.92
CPS1P31327 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.78■□□□□ 0.92
CPS1P31327 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC20.78■□□□□ 0.92
CPS1P31327 USB1-205ENST00000561743 1135 ntTSL 3 BASIC20.78■□□□□ 0.92
CPS1P31327 RN7SL357P-201ENST00000581065 298 ntBASIC20.78■□□□□ 0.92
CPS1P31327 CYP4F36P-201ENST00000589193 186 ntBASIC20.78■□□□□ 0.92
CPS1P31327 AC010976.2-201ENST00000609697 852 ntBASIC20.78■□□□□ 0.92
CPS1P31327 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC20.78■□□□□ 0.92
CPS1P31327 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.78■□□□□ 0.92
CPS1P31327 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.78■□□□□ 0.92
CPS1P31327 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CPS1P31327 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.78■□□□□ 0.92
CPS1P31327 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CPS1P31327 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.78■□□□□ 0.92
CPS1P31327 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CPS1P31327 AL513523.2-202ENST00000427283 2040 ntBASIC20.78■□□□□ 0.92
CPS1P31327 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPS1P31327 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.78■□□□□ 0.92
CPS1P31327 OR2R1P-201ENST00000441404 914 ntBASIC20.78■□□□□ 0.92
CPS1P31327 RPL3P5-201ENST00000441645 1232 ntBASIC20.78■□□□□ 0.92
CPS1P31327 ERP29P1-201ENST00000442902 706 ntBASIC20.78■□□□□ 0.92
CPS1P31327 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms