Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.25■□□□□ 0.19
HOXC8P31273 RBM8B-201ENST00000555532 525 ntBASIC16.25■□□□□ 0.19
HOXC8P31273 MIR3188-201ENST00000583494 85 ntBASIC16.25■□□□□ 0.19
HOXC8P31273 AC051619.9-201ENST00000623237 597 ntBASIC16.25■□□□□ 0.19
HOXC8P31273 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 LINC01165-201ENST00000445190 1623 ntBASIC16.25■□□□□ 0.19
HOXC8P31273 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 AC008894.3-201ENST00000624324 3103 ntBASIC16.25■□□□□ 0.19
HOXC8P31273 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
HOXC8P31273 ACE3P-201ENST00000423435 1973 ntBASIC16.24■□□□□ 0.19
HOXC8P31273 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.24■□□□□ 0.19
HOXC8P31273 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.24■□□□□ 0.19
HOXC8P31273 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.24■□□□□ 0.19
HOXC8P31273 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.24■□□□□ 0.19
HOXC8P31273 PHBP15-201ENST00000574228 665 ntBASIC16.24■□□□□ 0.19
HOXC8P31273 MIR3147-201ENST00000577811 66 ntBASIC16.24■□□□□ 0.19
HOXC8P31273 RN7SL555P-201ENST00000584742 339 ntBASIC16.24■□□□□ 0.19
HOXC8P31273 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HOXC8P31273 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 AC018629.1-201ENST00000623381 1736 ntBASIC16.24■□□□□ 0.19
HOXC8P31273 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 AC007950.2-201ENST00000615045 2347 ntBASIC16.24■□□□□ 0.19
HOXC8P31273 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC8P31273 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC8P31273 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC8P31273 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HOXC8P31273 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 MRPL37P1-201ENST00000592451 1337 ntBASIC16.23■□□□□ 0.19
HOXC8P31273 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HOXC8P31273 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC8P31273 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC8P31273 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.23■□□□□ 0.19
HOXC8P31273 AC008267.1-201ENST00000474858 1069 ntBASIC16.23■□□□□ 0.19
HOXC8P31273 RN7SL67P-201ENST00000492147 296 ntBASIC16.23■□□□□ 0.19
HOXC8P31273 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC8P31273 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
HOXC8P31273 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC8P31273 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.23■□□□□ 0.19
HOXC8P31273 MIR3677-201ENST00000578964 60 ntBASIC16.23■□□□□ 0.19
HOXC8P31273 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms