Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 ACE3P-201ENST00000423435 1973 ntBASIC14□□□□□ -0.17
ABCD3P28288 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
ABCD3P28288 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 AL138709.1-201ENST00000614840 1693 ntBASIC13.99□□□□□ -0.17
ABCD3P28288 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCD3P28288 C2orf27AP3-201ENST00000434123 579 ntBASIC13.99□□□□□ -0.17
ABCD3P28288 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.99□□□□□ -0.17
ABCD3P28288 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 AL354718.3-201ENST00000616414 581 ntBASIC13.99□□□□□ -0.17
ABCD3P28288 CR382287.1-201ENST00000623954 586 ntBASIC13.99□□□□□ -0.17
ABCD3P28288 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCD3P28288 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCD3P28288 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ABCD3P28288 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ABCD3P28288 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCD3P28288 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 AC006058.4-201ENST00000624016 1670 ntBASIC13.98□□□□□ -0.17
ABCD3P28288 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
ABCD3P28288 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ABCD3P28288 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCD3P28288 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCD3P28288 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ABCD3P28288 AC112492.5-201ENST00000421897 457 ntBASIC13.98□□□□□ -0.17
ABCD3P28288 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCD3P28288 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCD3P28288 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ABCD3P28288 FTH1P14-201ENST00000482930 551 ntBASIC13.98□□□□□ -0.17
ABCD3P28288 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCD3P28288 RAB43P1-201ENST00000561790 589 ntBASIC13.98□□□□□ -0.17
ABCD3P28288 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ABCD3P28288 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCD3P28288 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms