Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MMP8P22894 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP8P22894 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
MMP8P22894 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP8P22894 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.9■□□□□ 0.14
MMP8P22894 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
MMP8P22894 AP006294.1-201ENST00000415407 339 ntBASIC15.9■□□□□ 0.14
MMP8P22894 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 AC012441.1-201ENST00000446669 685 ntBASIC15.9■□□□□ 0.14
MMP8P22894 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MMP8P22894 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 MIR5189-201ENST00000577370 114 ntBASIC15.9■□□□□ 0.14
MMP8P22894 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 AC025048.6-201ENST00000634326 1161 ntBASIC15.9■□□□□ 0.14
MMP8P22894 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP8P22894 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
MMP8P22894 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP8P22894 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP8P22894 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MMP8P22894 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP8P22894 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
MMP8P22894 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
MMP8P22894 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 AC098614.1-201ENST00000368528 745 ntBASIC15.89■□□□□ 0.13
MMP8P22894 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MMP8P22894 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 BAATP1-201ENST00000412284 1225 ntBASIC15.89■□□□□ 0.13
MMP8P22894 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP8P22894 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP8P22894 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP8P22894 AC010319.3-201ENST00000597028 470 ntBASIC15.89■□□□□ 0.13
MMP8P22894 AC004466.1-201ENST00000599515 1080 ntBASIC15.89■□□□□ 0.13
MMP8P22894 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP8P22894 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
MMP8P22894 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MMP8P22894 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MMP8P22894 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP8P22894 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP8P22894 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms