Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.67□□□□□ -0.06
CAPN3P20807 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.67□□□□□ -0.06
CAPN3P20807 MTND6P24-201ENST00000440466 518 ntBASIC14.67□□□□□ -0.06
CAPN3P20807 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.67□□□□□ -0.06
CAPN3P20807 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 AC097493.3-201ENST00000509725 367 ntBASIC14.67□□□□□ -0.06
CAPN3P20807 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.67□□□□□ -0.06
CAPN3P20807 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.67□□□□□ -0.06
CAPN3P20807 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.67□□□□□ -0.06
CAPN3P20807 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 MIR6799-201ENST00000620297 69 ntBASIC14.67□□□□□ -0.06
CAPN3P20807 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.67□□□□□ -0.06
CAPN3P20807 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CAPN3P20807 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 AC015802.1-201ENST00000588104 1449 ntBASIC14.66□□□□□ -0.06
CAPN3P20807 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAPN3P20807 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAPN3P20807 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAPN3P20807 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 AC241585.1-201ENST00000433527 519 ntBASIC14.66□□□□□ -0.06
CAPN3P20807 SPDYE14P-201ENST00000442619 822 ntBASIC14.66□□□□□ -0.06
CAPN3P20807 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 GPR53P-205ENST00000457298 1084 ntBASIC14.66□□□□□ -0.06
CAPN3P20807 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.66□□□□□ -0.06
CAPN3P20807 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.66□□□□□ -0.06
CAPN3P20807 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 AC026150.2-201ENST00000564693 1156 ntBASIC14.66□□□□□ -0.06
CAPN3P20807 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.66□□□□□ -0.06
CAPN3P20807 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 AC152010.1-201ENST00000415779 2006 ntBASIC14.66□□□□□ -0.06
CAPN3P20807 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN3P20807 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN3P20807 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN3P20807 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.65□□□□□ -0.06
CAPN3P20807 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms