Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RAB4AP20338 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 AC104076.2-201ENST00000448912 469 ntBASIC11.72□□□□□ -0.53
RAB4AP20338 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 AC022616.7-201ENST00000525383 220 ntBASIC11.72□□□□□ -0.53
RAB4AP20338 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
RAB4AP20338 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 AC134407.2-201ENST00000625089 1978 ntBASIC11.72□□□□□ -0.53
RAB4AP20338 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RAB4AP20338 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
RAB4AP20338 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RAB4AP20338 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB4AP20338 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB4AP20338 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB4AP20338 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
RAB4AP20338 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB4AP20338 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB4AP20338 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 AL596275.1-201ENST00000423464 877 ntBASIC11.71□□□□□ -0.53
RAB4AP20338 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RAB4AP20338 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB4AP20338 AC074051.2-201ENST00000565115 352 ntBASIC11.71□□□□□ -0.53
RAB4AP20338 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB4AP20338 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB4AP20338 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
RAB4AP20338 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RAB4AP20338 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
RAB4AP20338 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.71□□□□□ -0.54
RAB4AP20338 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.71□□□□□ -0.54
RAB4AP20338 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.71□□□□□ -0.54
RAB4AP20338 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.71□□□□□ -0.54
RAB4AP20338 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms