Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CCL4P13236 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.19□□□□□ -0.14
CCL4P13236 AC007274.2-201ENST00000421675 662 ntBASIC14.19□□□□□ -0.14
CCL4P13236 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCL4P13236 TMEM198B-204ENST00000484016 896 ntBASIC14.19□□□□□ -0.14
CCL4P13236 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL4P13236 AC008805.1-201ENST00000590892 364 ntBASIC14.19□□□□□ -0.14
CCL4P13236 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL4P13236 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.19□□□□□ -0.14
CCL4P13236 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 DOC2GP-204ENST00000639052 2548 ntBASIC14.19□□□□□ -0.14
CCL4P13236 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 AC244394.1-201ENST00000435000 1665 ntBASIC14.19□□□□□ -0.14
CCL4P13236 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL4P13236 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CCL4P13236 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 AP000845.1-201ENST00000581677 2131 ntBASIC14.18□□□□□ -0.14
CCL4P13236 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL4P13236 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL4P13236 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CCL4P13236 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL4P13236 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL4P13236 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CCL4P13236 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 MIR33B-201ENST00000385104 96 ntBASIC14.18□□□□□ -0.14
CCL4P13236 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 AL596276.2-201ENST00000447525 331 ntBASIC14.18□□□□□ -0.14
CCL4P13236 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL4P13236 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.18□□□□□ -0.14
CCL4P13236 PRKXP1-201ENST00000561423 1122 ntBASIC14.18□□□□□ -0.14
CCL4P13236 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL4P13236 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL4P13236 AL353726.2-201ENST00000623259 884 ntBASIC14.18□□□□□ -0.14
CCL4P13236 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL4P13236 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL4P13236 LILRP1-201ENST00000444199 1370 ntBASIC14.18□□□□□ -0.14
CCL4P13236 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCL4P13236 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL4P13236 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL4P13236 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL4P13236 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL4P13236 MBLAC2-202ENST00000514906 1936 ntBASIC14.17□□□□□ -0.14
CCL4P13236 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL4P13236 AC006058.4-201ENST00000624016 1670 ntBASIC14.17□□□□□ -0.14
CCL4P13236 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL4P13236 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL4P13236 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL4P13236 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL4P13236 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL4P13236 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL4P13236 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL4P13236 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL4P13236 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms