Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 LINC01230-201ENST00000625222 3017 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LAMP1P11279 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.39□□□□□ -0.11
LAMP1P11279 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMP1P11279 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMP1P11279 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMP1P11279 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LAMP1P11279 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMP1P11279 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.39□□□□□ -0.11
LAMP1P11279 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.39□□□□□ -0.11
LAMP1P11279 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.39□□□□□ -0.11
LAMP1P11279 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.39□□□□□ -0.11
LAMP1P11279 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LAMP1P11279 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMP1P11279 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LAMP1P11279 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 AC023090.2-201ENST00000625182 2110 ntBASIC14.39□□□□□ -0.11
LAMP1P11279 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LAMP1P11279 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LAMP1P11279 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LAMP1P11279 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMP1P11279 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LAMP1P11279 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 SPDYE19P-201ENST00000338590 713 ntBASIC14.38□□□□□ -0.11
LAMP1P11279 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
LAMP1P11279 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.38□□□□□ -0.11
LAMP1P11279 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.38□□□□□ -0.11
LAMP1P11279 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMP1P11279 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMP1P11279 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms