Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSB-PGBD3P0DP91 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 AL355334.1-201ENST00000417713 215 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 RN7SL8P-201ENST00000461771 266 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 RN7SL818P-201ENST00000485099 259 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 AC009884.2-201ENST00000603110 324 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 RN7SL725P-201ENST00000606439 259 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 REXO1L4P-201ENST00000605109 1937 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 FAM90A7P-201ENST00000382628 1395 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 FAM90A23P-201ENST00000400136 1395 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 AC136759.1-202ENST00000530858 2194 ntBASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSB-PGBD3P0DP91 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 AC239868.1-201ENST00000369385 493 ntBASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 AC135983.4-201ENST00000564116 1262 ntBASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSB-PGBD3P0DP91 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CSB-PGBD3P0DP91 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms