Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
FREM3P0C091 MROH4P-201ENST00000431302 1578 ntBASIC13.77□□□□□ -0.21
FREM3P0C091 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FREM3P0C091 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FREM3P0C091 REXO1L6P-201ENST00000603433 1515 ntBASIC13.77□□□□□ -0.21
FREM3P0C091 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 AL136379.1-201ENST00000623471 2642 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
FREM3P0C091 BOLA2P3-201ENST00000404566 256 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 RNA5SP412-201ENST00000516234 123 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.76□□□□□ -0.21
FREM3P0C091 AP000812.2-201ENST00000538934 718 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 AC004466.1-201ENST00000599515 1080 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.76□□□□□ -0.21
FREM3P0C091 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 AL354989.2-201ENST00000435838 1540 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 BRWD1P1-201ENST00000401091 371 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.76□□□□□ -0.21
FREM3P0C091 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
FREM3P0C091 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 ECM1P1-201ENST00000604092 1279 ntBASIC13.76□□□□□ -0.21
FREM3P0C091 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FREM3P0C091 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.76□□□□□ -0.21
FREM3P0C091 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.76□□□□□ -0.21
FREM3P0C091 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.76□□□□□ -0.21
FREM3P0C091 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 TUBB1P2-201ENST00000422712 1306 ntBASIC13.75□□□□□ -0.21
FREM3P0C091 TUBB1P1-201ENST00000503144 1300 ntBASIC13.75□□□□□ -0.21
FREM3P0C091 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.75□□□□□ -0.21
FREM3P0C091 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.75□□□□□ -0.21
FREM3P0C091 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.75□□□□□ -0.21
FREM3P0C091 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
FREM3P0C091 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms