Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLTAP09496 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.64■□□□□ 0.25
CLTAP09496 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.64■□□□□ 0.25
CLTAP09496 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 AC234783.1-201ENST00000441761 496 ntBASIC16.64■□□□□ 0.25
CLTAP09496 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.64■□□□□ 0.25
CLTAP09496 CROCCP4-201ENST00000457096 498 ntBASIC16.64■□□□□ 0.25
CLTAP09496 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLTAP09496 AC106760.1-201ENST00000508690 800 ntBASIC16.64■□□□□ 0.25
CLTAP09496 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.64■□□□□ 0.25
CLTAP09496 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CLTAP09496 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLTAP09496 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.64■□□□□ 0.25
CLTAP09496 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.64■□□□□ 0.25
CLTAP09496 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.63■□□□□ 0.25
CLTAP09496 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLTAP09496 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.63■□□□□ 0.25
CLTAP09496 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.63■□□□□ 0.25
CLTAP09496 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.63■□□□□ 0.25
CLTAP09496 ACTBP8-201ENST00000403258 1108 ntBASIC16.63■□□□□ 0.25
CLTAP09496 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 IGHV3-71-201ENST00000523324 359 ntBASIC16.63■□□□□ 0.25
CLTAP09496 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.63■□□□□ 0.25
CLTAP09496 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.63■□□□□ 0.25
CLTAP09496 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.63■□□□□ 0.25
CLTAP09496 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.63■□□□□ 0.25
CLTAP09496 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLTAP09496 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.63■□□□□ 0.25
CLTAP09496 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CLTAP09496 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLTAP09496 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLTAP09496 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLTAP09496 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.62■□□□□ 0.25
CLTAP09496 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLTAP09496 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.62■□□□□ 0.25
CLTAP09496 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.62■□□□□ 0.25
CLTAP09496 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.62■□□□□ 0.25
CLTAP09496 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLTAP09496 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms