Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 CLK3P2-201ENST00000427566 1453 ntBASIC15.26■□□□□ 0.03
APOA4P06727 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
APOA4P06727 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 AL359258.3-201ENST00000622910 2331 ntBASIC15.26■□□□□ 0.03
APOA4P06727 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA4P06727 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.25■□□□□ 0.03
APOA4P06727 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.25■□□□□ 0.03
APOA4P06727 DFFBP1-201ENST00000433250 979 ntBASIC15.25■□□□□ 0.03
APOA4P06727 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 RN7SL399P-201ENST00000471648 279 ntBASIC15.25■□□□□ 0.03
APOA4P06727 FAM86LP-201ENST00000478302 853 ntBASIC15.25■□□□□ 0.03
APOA4P06727 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.25■□□□□ 0.03
APOA4P06727 AC104596.2-201ENST00000512793 793 ntBASIC15.25■□□□□ 0.03
APOA4P06727 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
APOA4P06727 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.25■□□□□ 0.03
APOA4P06727 MIR4745-201ENST00000577608 62 ntBASIC15.25■□□□□ 0.03
APOA4P06727 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.25■□□□□ 0.03
APOA4P06727 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.25■□□□□ 0.03
APOA4P06727 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 AC008761.3-201ENST00000624803 892 ntBASIC15.25■□□□□ 0.03
APOA4P06727 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 REXO1L4P-201ENST00000605109 1937 ntBASIC15.25■□□□□ 0.03
APOA4P06727 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
APOA4P06727 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA4P06727 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA4P06727 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.24■□□□□ 0.03
APOA4P06727 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APOA4P06727 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 SLC7A15P-201ENST00000424028 1363 ntBASIC15.24■□□□□ 0.03
APOA4P06727 AL391825.1-201ENST00000457671 1364 ntBASIC15.24■□□□□ 0.03
APOA4P06727 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APOA4P06727 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.24■□□□□ 0.03
APOA4P06727 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.24■□□□□ 0.03
APOA4P06727 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 AC002472.2-201ENST00000442739 958 ntBASIC15.24■□□□□ 0.03
APOA4P06727 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.24■□□□□ 0.03
APOA4P06727 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
APOA4P06727 RN7SL204P-201ENST00000582831 262 ntBASIC15.24■□□□□ 0.03
APOA4P06727 AC099568.2-201ENST00000609194 695 ntBASIC15.24■□□□□ 0.03
APOA4P06727 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.24■□□□□ 0.03
APOA4P06727 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.24■□□□□ 0.03
APOA4P06727 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APOA4P06727 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOA4P06727 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms