Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 CR383656.2-201ENST00000548656 2254 ntBASIC16.29■□□□□ 0.2
TUBB4AP04350 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 AKAP8P1-201ENST00000434743 1349 ntBASIC16.29■□□□□ 0.2
TUBB4AP04350 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TUBB4AP04350 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TUBB4AP04350 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TUBB4AP04350 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TUBB4AP04350 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBB4AP04350 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TUBB4AP04350 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
TUBB4AP04350 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBB4AP04350 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBB4AP04350 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBB4AP04350 AC025181.2-201ENST00000606994 802 ntBASIC16.29■□□□□ 0.2
TUBB4AP04350 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBB4AP04350 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TUBB4AP04350 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBB4AP04350 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TUBB4AP04350 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBB4AP04350 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBB4AP04350 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 AC114271.1-201ENST00000612689 2813 ntBASIC16.28■□□□□ 0.2
TUBB4AP04350 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TUBB4AP04350 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TUBB4AP04350 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TUBB4AP04350 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBB4AP04350 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
TUBB4AP04350 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBB4AP04350 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 RARRES2P8-201ENST00000566335 367 ntBASIC16.28■□□□□ 0.2
TUBB4AP04350 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBB4AP04350 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TUBB4AP04350 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBB4AP04350 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TUBB4AP04350 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBB4AP04350 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TUBB4AP04350 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TUBB4AP04350 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBB4AP04350 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBB4AP04350 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBB4AP04350 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBB4AP04350 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TUBB4AP04350 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
TUBB4AP04350 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBB4AP04350 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBB4AP04350 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBB4AP04350 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBB4AP04350 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBB4AP04350 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms