Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CD74P04233 AL353705.2-201ENST00000428243 662 ntBASIC12.78□□□□□ -0.36
CD74P04233 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.78□□□□□ -0.36
CD74P04233 AC079781.3-201ENST00000449110 356 ntBASIC12.78□□□□□ -0.36
CD74P04233 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.78□□□□□ -0.36
CD74P04233 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.78□□□□□ -0.36
CD74P04233 AC105021.1-202ENST00000570572 669 ntBASIC12.78□□□□□ -0.36
CD74P04233 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 AC074044.1-201ENST00000609673 707 ntBASIC12.78□□□□□ -0.36
CD74P04233 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD74P04233 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD74P04233 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 AL591122.2-201ENST00000624125 1853 ntBASIC12.78□□□□□ -0.36
CD74P04233 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.78□□□□□ -0.36
CD74P04233 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD74P04233 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD74P04233 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD74P04233 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
CD74P04233 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CD74P04233 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.77□□□□□ -0.36
CD74P04233 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.77□□□□□ -0.36
CD74P04233 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD74P04233 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD74P04233 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CD74P04233 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD74P04233 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD74P04233 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
CD74P04233 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CD74P04233 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CD74P04233 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CD74P04233 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CD74P04233 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CD74P04233 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
CD74P04233 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.77□□□□□ -0.37
CD74P04233 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.77□□□□□ -0.37
CD74P04233 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.77□□□□□ -0.37
CD74P04233 IGHV3-62-201ENST00000520057 340 ntBASIC12.77□□□□□ -0.37
CD74P04233 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.77□□□□□ -0.37
CD74P04233 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.77□□□□□ -0.37
CD74P04233 AC145285.3-201ENST00000564603 959 ntBASIC12.77□□□□□ -0.37
CD74P04233 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.77□□□□□ -0.37
CD74P04233 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.77□□□□□ -0.37
CD74P04233 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
CD74P04233 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.77□□□□□ -0.37
CD74P04233 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.77□□□□□ -0.37
CD74P04233 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CD74P04233 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.77□□□□□ -0.37
CD74P04233 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CD74P04233 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CD74P04233 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.77□□□□□ -0.37
CD74P04233 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 Z97205.2-201ENST00000564697 1639 ntBASIC12.77□□□□□ -0.37
CD74P04233 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD74P04233 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms