Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC1P02654 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
APOC1P02654 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC1P02654 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.52□□□□□ -0.24
APOC1P02654 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
APOC1P02654 AC013726.1-201ENST00000563747 2285 ntBASIC13.52□□□□□ -0.24
APOC1P02654 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC1P02654 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC1P02654 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.52□□□□□ -0.24
APOC1P02654 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC1P02654 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.52□□□□□ -0.24
APOC1P02654 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC1P02654 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
APOC1P02654 AL139385.1-201ENST00000611744 3272 ntBASIC13.52□□□□□ -0.24
APOC1P02654 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
APOC1P02654 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOC1P02654 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
APOC1P02654 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC1P02654 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC1P02654 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
APOC1P02654 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC1P02654 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC1P02654 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOC1P02654 AL512361.1-201ENST00000554200 418 ntBASIC13.52□□□□□ -0.25
APOC1P02654 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
APOC1P02654 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC1P02654 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC1P02654 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC1P02654 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.52□□□□□ -0.25
APOC1P02654 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
APOC1P02654 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 BTBD7P1-201ENST00000447253 1453 ntBASIC13.52□□□□□ -0.25
APOC1P02654 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 AL121723.1-201ENST00000445194 1519 ntBASIC13.52□□□□□ -0.25
APOC1P02654 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC1P02654 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
APOC1P02654 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC1P02654 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC1P02654 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.51□□□□□ -0.25
APOC1P02654 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
APOC1P02654 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC1P02654 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms