Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.56□□□□□ -0.24
CNOT4O95628 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 SLC25A47P1-201ENST00000531577 414 ntBASIC13.56□□□□□ -0.24
CNOT4O95628 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.56□□□□□ -0.24
CNOT4O95628 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.56□□□□□ -0.24
CNOT4O95628 SAMD11P1-201ENST00000571429 661 ntBASIC13.56□□□□□ -0.24
CNOT4O95628 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 AC084346.2-201ENST00000607097 949 ntBASIC13.56□□□□□ -0.24
CNOT4O95628 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.56□□□□□ -0.24
CNOT4O95628 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CNOT4O95628 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CNOT4O95628 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CNOT4O95628 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CNOT4O95628 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.55□□□□□ -0.24
CNOT4O95628 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.55□□□□□ -0.24
CNOT4O95628 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.55□□□□□ -0.24
CNOT4O95628 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CNOT4O95628 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 GHSR-202ENST00000427970 912 ntBASIC13.55□□□□□ -0.24
CNOT4O95628 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.55□□□□□ -0.24
CNOT4O95628 AP001582.1-201ENST00000525856 295 ntBASIC13.55□□□□□ -0.24
CNOT4O95628 SNX29P1-201ENST00000548357 1007 ntBASIC13.55□□□□□ -0.24
CNOT4O95628 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.55□□□□□ -0.24
CNOT4O95628 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.55□□□□□ -0.24
CNOT4O95628 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 AC134312.5-201ENST00000568031 1313 ntBASIC13.55□□□□□ -0.24
CNOT4O95628 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CNOT4O95628 AC067750.1-201ENST00000608826 6545 ntBASIC13.55□□□□□ -0.24
CNOT4O95628 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.55□□□□□ -0.24
CNOT4O95628 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CNOT4O95628 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNOT4O95628 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 AC007787.1-201ENST00000588095 1583 ntBASIC13.54□□□□□ -0.24
CNOT4O95628 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.54□□□□□ -0.24
CNOT4O95628 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNOT4O95628 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms