Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 AC027601.3-201ENST00000622907 509 ntBASIC6.56□□□□□ -1.36
USH2AO75445 AL050341.2-201ENST00000567508 1541 ntBASIC6.56□□□□□ -1.36
USH2AO75445 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 SUPT20HL2-201ENST00000486479 2409 ntBASIC6.56□□□□□ -1.36
USH2AO75445 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 CDKN2A-AS1-201ENST00000441769 823 ntBASIC6.56□□□□□ -1.36
USH2AO75445 RGS5-216ENST00000449680 788 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC6.56□□□□□ -1.36
USH2AO75445 AP003040.1-201ENST00000532044 1024 ntBASIC6.56□□□□□ -1.36
USH2AO75445 RN7SL357P-201ENST00000581065 298 ntBASIC6.56□□□□□ -1.36
USH2AO75445 AC016582.2-202ENST00000587765 1094 ntBASIC6.56□□□□□ -1.36
USH2AO75445 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC6.55□□□□□ -1.36
USH2AO75445 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 AC068831.5-201ENST00000557387 328 ntBASIC6.55□□□□□ -1.36
USH2AO75445 AC087072.1-201ENST00000603727 421 ntBASIC6.55□□□□□ -1.36
USH2AO75445 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC6.55□□□□□ -1.36
USH2AO75445 AC138627.1-201ENST00000641127 1257 ntBASIC6.55□□□□□ -1.36
USH2AO75445 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 RPL4P6-201ENST00000438116 1304 ntBASIC6.55□□□□□ -1.36
USH2AO75445 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
USH2AO75445 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 CICP13-201ENST00000422015 2789 ntBASIC6.55□□□□□ -1.36
USH2AO75445 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC6.55□□□□□ -1.36
USH2AO75445 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC6.55□□□□□ -1.36
USH2AO75445 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 RPL3P5-201ENST00000441645 1232 ntBASIC6.55□□□□□ -1.36
USH2AO75445 AC025594.1-201ENST00000469533 543 ntBASIC6.55□□□□□ -1.36
USH2AO75445 GPX3-202ENST00000517973 612 ntTSL 3 BASIC6.55□□□□□ -1.36
USH2AO75445 IGHV1-12-201ENST00000518307 205 ntBASIC6.55□□□□□ -1.36
USH2AO75445 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 ACTBP9-201ENST00000587663 1099 ntBASIC6.55□□□□□ -1.36
USH2AO75445 APOC1-209ENST00000592885 562 ntTSL 3 BASIC6.55□□□□□ -1.36
USH2AO75445 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms