Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
PDE6DO43924 AC073389.1-201ENST00000595595 795 ntBASIC11.81□□□□□ -0.52
PDE6DO43924 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
PDE6DO43924 AC026979.3-201ENST00000607315 403 ntBASIC11.81□□□□□ -0.52
PDE6DO43924 AL161645.1-201ENST00000622716 1255 ntBASIC11.81□□□□□ -0.52
PDE6DO43924 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.81□□□□□ -0.52
PDE6DO43924 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.81□□□□□ -0.52
PDE6DO43924 NUTM2HP-201ENST00000442076 2498 ntBASIC11.81□□□□□ -0.52
PDE6DO43924 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.81□□□□□ -0.52
PDE6DO43924 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.8□□□□□ -0.52
PDE6DO43924 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.8□□□□□ -0.52
PDE6DO43924 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
PDE6DO43924 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
PDE6DO43924 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.8□□□□□ -0.52
PDE6DO43924 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.8□□□□□ -0.52
PDE6DO43924 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.8□□□□□ -0.52
PDE6DO43924 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 AC090505.1-201ENST00000430515 1834 ntBASIC11.8□□□□□ -0.52
PDE6DO43924 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
PDE6DO43924 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
PDE6DO43924 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.8□□□□□ -0.52
PDE6DO43924 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PDE6DO43924 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PDE6DO43924 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.79□□□□□ -0.52
PDE6DO43924 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 AL354702.1-201ENST00000442006 1960 ntBASIC11.79□□□□□ -0.52
PDE6DO43924 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PDE6DO43924 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms