Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.15■□□□□ 0.02
LDB2O43679 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 AP006294.1-201ENST00000415407 339 ntBASIC15.15■□□□□ 0.02
LDB2O43679 ACTG1P3-201ENST00000431775 1114 ntBASIC15.15■□□□□ 0.02
LDB2O43679 AC244107.1-201ENST00000442033 332 ntBASIC15.15■□□□□ 0.02
LDB2O43679 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.15■□□□□ 0.02
LDB2O43679 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.15■□□□□ 0.02
LDB2O43679 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.15■□□□□ 0.02
LDB2O43679 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.15■□□□□ 0.02
LDB2O43679 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.15■□□□□ 0.02
LDB2O43679 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.15■□□□□ 0.02
LDB2O43679 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.15■□□□□ 0.02
LDB2O43679 AC007686.3-201ENST00000619017 3487 ntBASIC15.15■□□□□ 0.02
LDB2O43679 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LDB2O43679 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LDB2O43679 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LDB2O43679 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 AC140479.7-201ENST00000636301 2332 ntBASIC15.15■□□□□ 0.02
LDB2O43679 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
LDB2O43679 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.15■□□□□ 0.02
LDB2O43679 KRT8P35-201ENST00000483942 1338 ntBASIC15.15■□□□□ 0.02
LDB2O43679 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LDB2O43679 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LDB2O43679 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 AC018665.1-201ENST00000622927 1362 ntBASIC15.14■□□□□ 0.01
LDB2O43679 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 LRRC59-203ENST00000576448 1531 ntBASIC15.14■□□□□ 0.01
LDB2O43679 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LDB2O43679 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LDB2O43679 AC098614.1-201ENST00000368528 745 ntBASIC15.14■□□□□ 0.01
LDB2O43679 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.14■□□□□ 0.01
LDB2O43679 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 KRT18P25-201ENST00000508931 1278 ntBASIC15.14■□□□□ 0.01
LDB2O43679 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.14■□□□□ 0.01
LDB2O43679 MIR5189-201ENST00000577370 114 ntBASIC15.14■□□□□ 0.01
LDB2O43679 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.14■□□□□ 0.01
LDB2O43679 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 AC010319.3-201ENST00000597028 470 ntBASIC15.14■□□□□ 0.01
LDB2O43679 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.14■□□□□ 0.01
LDB2O43679 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LDB2O43679 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LDB2O43679 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LDB2O43679 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.13■□□□□ 0.01
LDB2O43679 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.13■□□□□ 0.01
LDB2O43679 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms