Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KCNQ3O43525 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KCNQ3O43525 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 WASH3P-207ENST00000560956 1394 ntBASIC19.22■□□□□ 0.67
KCNQ3O43525 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ3O43525 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ3O43525 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ3O43525 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNQ3O43525 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.22■□□□□ 0.67
KCNQ3O43525 CICP12-201ENST00000455801 843 ntBASIC19.22■□□□□ 0.67
KCNQ3O43525 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ3O43525 MARK2P5-201ENST00000507649 634 ntBASIC19.22■□□□□ 0.67
KCNQ3O43525 SCARNA21-201ENST00000517026 139 ntBASIC19.22■□□□□ 0.67
KCNQ3O43525 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNQ3O43525 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ3O43525 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.22■□□□□ 0.67
KCNQ3O43525 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ3O43525 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ3O43525 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNQ3O43525 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.22■□□□□ 0.67
KCNQ3O43525 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ3O43525 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
KCNQ3O43525 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNQ3O43525 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNQ3O43525 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 AL109954.1-202ENST00000564051 2148 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNQ3O43525 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNQ3O43525 AC024681.1-201ENST00000521917 487 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNQ3O43525 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.21■□□□□ 0.67
KCNQ3O43525 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNQ3O43525 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNQ3O43525 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNQ3O43525 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 AC005962.1-201ENST00000584100 773 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 AL133499.1-201ENST00000596207 608 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ3O43525 AC091812.3-201ENST00000621362 345 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 AC015967.2-201ENST00000624092 234 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 AC006435.4-201ENST00000625037 234 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 AL356737.1-201ENST00000634391 234 ntBASIC19.21■□□□□ 0.67
KCNQ3O43525 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ3O43525 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ3O43525 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNQ3O43525 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KCNQ3O43525 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNQ3O43525 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
KCNQ3O43525 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ3O43525 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNQ3O43525 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.2■□□□□ 0.66
KCNQ3O43525 MIR769-201ENST00000390225 118 ntBASIC19.2■□□□□ 0.66
KCNQ3O43525 PUDPP3-201ENST00000445368 636 ntBASIC19.2■□□□□ 0.66
KCNQ3O43525 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 GCOM2-201ENST00000509133 1104 ntBASIC19.2■□□□□ 0.66
KCNQ3O43525 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
KCNQ3O43525 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ3O43525 AC131206.1-201ENST00000538078 1211 ntBASIC19.2■□□□□ 0.66
KCNQ3O43525 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ3O43525 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ3O43525 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ3O43525 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ3O43525 AC091544.8-201ENST00000619490 361 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms