Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD2O14647 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC20.36■□□□□ 0.85
CHD2O14647 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC20.36■□□□□ 0.85
CHD2O14647 ALG1L3P-201ENST00000503331 765 ntBASIC20.36■□□□□ 0.85
CHD2O14647 AC095040.1-201ENST00000513286 675 ntBASIC20.36■□□□□ 0.85
CHD2O14647 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC20.36■□□□□ 0.85
CHD2O14647 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD2O14647 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC20.36■□□□□ 0.85
CHD2O14647 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHD2O14647 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHD2O14647 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD2O14647 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CHD2O14647 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD2O14647 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHD2O14647 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 AL591122.2-201ENST00000624125 1853 ntBASIC20.35■□□□□ 0.85
CHD2O14647 PTGER4P2-201ENST00000328411 252 ntBASIC20.35■□□□□ 0.85
CHD2O14647 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.35■□□□□ 0.85
CHD2O14647 PTGER4P3-201ENST00000458150 252 ntBASIC20.35■□□□□ 0.85
CHD2O14647 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CHD2O14647 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC20.35■□□□□ 0.85
CHD2O14647 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD2O14647 TREHP1-201ENST00000531328 465 ntBASIC20.35■□□□□ 0.85
CHD2O14647 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD2O14647 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD2O14647 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CHD2O14647 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.35■□□□□ 0.85
CHD2O14647 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD2O14647 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD2O14647 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 SSR4P1-203ENST00000599569 2260 ntBASIC20.35■□□□□ 0.85
CHD2O14647 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD2O14647 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.35■□□□□ 0.85
CHD2O14647 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.35■□□□□ 0.85
CHD2O14647 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD2O14647 ACTG1P19-201ENST00000418987 1116 ntBASIC20.34■□□□□ 0.85
CHD2O14647 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CHD2O14647 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD2O14647 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC20.34■□□□□ 0.85
CHD2O14647 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD2O14647 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD2O14647 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD2O14647 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 AC090386.2-201ENST00000623010 1039 ntBASIC20.34■□□□□ 0.85
CHD2O14647 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD2O14647 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 AC112693.3-201ENST00000624819 1983 ntBASIC20.34■□□□□ 0.85
CHD2O14647 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD2O14647 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC20.34■□□□□ 0.85
CHD2O14647 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD2O14647 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
CHD2O14647 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 AC092862.1-201ENST00000541534 533 ntBASIC20.34■□□□□ 0.85
CHD2O14647 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD2O14647 KRT8P2-201ENST00000556193 944 ntBASIC20.34■□□□□ 0.85
CHD2O14647 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CHD2O14647 CYP4F36P-201ENST00000589193 186 ntBASIC20.34■□□□□ 0.85
CHD2O14647 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CHD2O14647 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CHD2O14647 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD2O14647 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms