Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM38O00635 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM38O00635 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM38O00635 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRIM38O00635 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 FO681548.1-201ENST00000455617 1132 ntBASIC15.34■□□□□ 0.05
TRIM38O00635 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM38O00635 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM38O00635 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM38O00635 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRIM38O00635 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 AL450472.2-201ENST00000603663 1156 ntBASIC15.34■□□□□ 0.05
TRIM38O00635 AL606495.2-201ENST00000605867 535 ntBASIC15.34■□□□□ 0.05
TRIM38O00635 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM38O00635 MIR6869-201ENST00000619434 62 ntBASIC15.34■□□□□ 0.05
TRIM38O00635 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM38O00635 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 KRT8P44-201ENST00000441609 1350 ntBASIC15.34■□□□□ 0.05
TRIM38O00635 MSTO2P-201ENST00000314835 1709 ntBASIC15.34■□□□□ 0.05
TRIM38O00635 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM38O00635 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM38O00635 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRIM38O00635 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM38O00635 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRIM38O00635 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
TRIM38O00635 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRIM38O00635 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRIM38O00635 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.33■□□□□ 0.05
TRIM38O00635 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.33■□□□□ 0.05
TRIM38O00635 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM38O00635 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 BAATP1-201ENST00000412284 1225 ntBASIC15.33■□□□□ 0.04
TRIM38O00635 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 AL355864.2-201ENST00000447420 863 ntBASIC15.33■□□□□ 0.04
TRIM38O00635 AC007551.1-201ENST00000457394 519 ntBASIC15.33■□□□□ 0.04
TRIM38O00635 RNA5SP412-201ENST00000516234 123 ntBASIC15.33■□□□□ 0.04
TRIM38O00635 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 AP000812.2-201ENST00000538934 718 ntBASIC15.33■□□□□ 0.04
TRIM38O00635 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM38O00635 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM38O00635 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM38O00635 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM38O00635 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRIM38O00635 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM38O00635 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM38O00635 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
TRIM38O00635 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM38O00635 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM38O00635 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM38O00635 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM38O00635 MROH4P-201ENST00000431302 1578 ntBASIC15.32■□□□□ 0.04
TRIM38O00635 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms