Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRAMEF25A6NGN4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRAMEF25A6NGN4 AC012508.2-201ENST00000567613 1472 ntBASIC14.24□□□□□ -0.13
PRAMEF25A6NGN4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRAMEF25A6NGN4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRAMEF25A6NGN4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRAMEF25A6NGN4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 DGCR5-201ENST00000399539 862 ntBASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 AP006294.1-201ENST00000415407 339 ntBASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 AL442647.2-201ENST00000429864 857 ntBASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 RN7SL692P-201ENST00000464677 288 ntBASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 AL645728.2-202ENST00000641679 227 ntBASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 INTS4P2-202ENST00000614726 2019 ntBASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PRAMEF25A6NGN4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 INTS4P1-203ENST00000641008 3683 ntBASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 AC134915.1-201ENST00000426461 574 ntBASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 CTBP2P3-201ENST00000585629 1255 ntBASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 AC105233.6-201ENST00000642093 218 ntBASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms