Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 PCDHB19P-201ENST00000570871 2371 ntBASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 AC087392.5-201ENST00000612517 489 ntBASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC22.91■■□□□ 1.26
PLEKHD1A6NEE1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 AC092850.2-201ENST00000623821 2697 ntBASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 AC114947.1-202ENST00000514136 344 ntBASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 TMCO5B-205ENST00000530020 894 ntBASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 AC127024.7-201ENST00000625101 200 ntBASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 FAS-202ENST00000352159 1722 ntTSL 5 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PLEKHD1A6NEE1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PLEKHD1A6NEE1 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC22.89■■□□□ 1.26
PLEKHD1A6NEE1 RNF165-205ENST00000588679 2904 ntBASIC22.89■■□□□ 1.26
PLEKHD1A6NEE1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC22.89■■□□□ 1.26
PLEKHD1A6NEE1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 RNA5SP359-201ENST00000364838 113 ntBASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 Z69890.1-201ENST00000382990 339 ntBASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 FTH1P22-201ENST00000456305 520 ntBASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 AC007326.1-201ENST00000604539 458 ntBASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 AC084781.1-201ENST00000613737 656 ntBASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 AP001184.1-201ENST00000637936 376 ntBASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PLEKHD1A6NEE1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 AC013726.1-201ENST00000563747 2285 ntBASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 AL513523.2-202ENST00000427283 2040 ntBASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 HNRNPA1P27-201ENST00000412087 955 ntBASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 LYPLA2P1-203ENST00000447689 696 ntBASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms