Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 AP001889.1-201ENST00000525414 633 ntBASIC14.42□□□□□ -0.1
LRIT2A6NDA9 AC005225.4-201ENST00000557330 545 ntBASIC14.42□□□□□ -0.1
LRIT2A6NDA9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 IGHV3-72-202ENST00000621503 303 ntBASIC14.42□□□□□ -0.1
LRIT2A6NDA9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRIT2A6NDA9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 CICP14-201ENST00000629111 2732 ntBASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AC005229.1-201ENST00000392885 409 ntBASIC14.41□□□□□ -0.1
LRIT2A6NDA9 SLC25A47P1-201ENST00000531577 414 ntBASIC14.41□□□□□ -0.1
LRIT2A6NDA9 CR383656.12-201ENST00000549567 513 ntBASIC14.41□□□□□ -0.1
LRIT2A6NDA9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AC008735.3-201ENST00000596646 500 ntBASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AC145423.3-201ENST00000615987 467 ntBASIC14.41□□□□□ -0.1
LRIT2A6NDA9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AC018442.1-201ENST00000421439 2061 ntBASIC14.41□□□□□ -0.1
LRIT2A6NDA9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRIT2A6NDA9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.4□□□□□ -0.1
LRIT2A6NDA9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms