Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VPS37CA5D8V6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 TIMM17BP1-201ENST00000545713 516 ntBASIC17.77■□□□□ 0.44
VPS37CA5D8V6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 AC093028.1-201ENST00000622998 982 ntBASIC17.77■□□□□ 0.44
VPS37CA5D8V6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS37CA5D8V6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS37CA5D8V6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 AC100757.3-201ENST00000622361 1406 ntBASIC17.76■□□□□ 0.43
VPS37CA5D8V6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 AL691403.2-201ENST00000618460 490 ntBASIC17.76■□□□□ 0.43
VPS37CA5D8V6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VPS37CA5D8V6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 MIR1233-2-201ENST00000408138 82 ntBASIC17.75■□□□□ 0.43
VPS37CA5D8V6 MIR1233-1-201ENST00000408722 82 ntBASIC17.75■□□□□ 0.43
VPS37CA5D8V6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS37CA5D8V6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms