Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 AC017081.1-201ENST00000420063 823 ntBASIC5.95□□□□□ -1.46
MACF1Q9UPN3 TSEN15P3-201ENST00000422363 367 ntBASIC5.95□□□□□ -1.46
MACF1Q9UPN3 RN7SL277P-201ENST00000481521 288 ntBASIC5.95□□□□□ -1.46
MACF1Q9UPN3 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC5.95□□□□□ -1.46
MACF1Q9UPN3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 RN7SL832P-201ENST00000607781 1756 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 KRT18P36-201ENST00000411618 1276 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 OR8T1P-201ENST00000421347 918 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 CARS-216ENST00000639317 135 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 UBALD1-205ENST00000590891 2641 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 BNC2-207ENST00000471301 745 ntTSL 3 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC022382.1-201ENST00000602768 336 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC073592.10-201ENST00000624789 597 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AP001282.1-201ENST00000531301 1499 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC006449.6-201ENST00000612330 2296 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC006001.3-205ENST00000428370 579 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC253536.1-201ENST00000437021 315 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 FAM86DP-202ENST00000477247 995 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 MIR2277-201ENST00000515916 93 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC007378.1-201ENST00000609765 478 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC022080.1-201ENST00000366255 781 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 DUX4L50-201ENST00000455245 715 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 RN7SL624P-201ENST00000580297 278 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AL136084.1-201ENST00000449172 318 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 RN7SL76P-201ENST00000482435 289 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC026336.4-201ENST00000624565 1050 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms