Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC125604.1-201ENST00000496255 707 ntBASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AC106872.11-201ENST00000605838 421 ntBASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AC138627.1-207ENST00000641560 1006 ntBASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 FAM90A7P-201ENST00000382628 1395 ntBASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 FAM90A23P-201ENST00000400136 1395 ntBASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 MIR769-201ENST00000390225 118 ntBASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AL662890.1-201ENST00000396818 632 ntBASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AL645933.1-201ENST00000440087 609 ntBASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 KLF2P1-201ENST00000447438 1042 ntBASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AC009779.1-201ENST00000551138 283 ntBASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SYNPO2Q9UMS6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 AC092135.3-201ENST00000624151 1846 ntBASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 AL805961.1-203ENST00000641078 1258 ntBASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPO2Q9UMS6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms