Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 KRT8P29-201ENST00000420409 1371 ntBASIC16.99■□□□□ 0.31
COL20A1Q9P218 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 ZBED1P1-201ENST00000502364 1930 ntBASIC16.98■□□□□ 0.31
COL20A1Q9P218 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.98■□□□□ 0.31
COL20A1Q9P218 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 DUX4L46-201ENST00000566845 751 ntBASIC16.98■□□□□ 0.31
COL20A1Q9P218 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.98■□□□□ 0.31
COL20A1Q9P218 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 LINC00528-201ENST00000600723 2160 ntBASIC16.98■□□□□ 0.31
COL20A1Q9P218 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL20A1Q9P218 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.98■□□□□ 0.31
COL20A1Q9P218 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COL20A1Q9P218 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 TLE1P1-201ENST00000422965 589 ntBASIC16.97■□□□□ 0.31
COL20A1Q9P218 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 AC021723.1-201ENST00000486306 515 ntBASIC16.97■□□□□ 0.31
COL20A1Q9P218 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 AC131206.1-201ENST00000538078 1211 ntBASIC16.97■□□□□ 0.31
COL20A1Q9P218 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 AL021578.1-201ENST00000613646 709 ntBASIC16.97■□□□□ 0.31
COL20A1Q9P218 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 AC007292.2-201ENST00000593524 1812 ntBASIC16.97■□□□□ 0.31
COL20A1Q9P218 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 AC092384.3-202ENST00000564646 2873 ntBASIC16.97■□□□□ 0.31
COL20A1Q9P218 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 AC006058.4-201ENST00000624016 1670 ntBASIC16.97■□□□□ 0.31
COL20A1Q9P218 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
COL20A1Q9P218 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL20A1Q9P218 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms