Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 AC092337.1-201ENST00000568699 1129 ntBASIC14.98□□□□□ -0.01
MKS1Q9NXB0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 AL391069.4-201ENST00000609583 481 ntBASIC14.98□□□□□ -0.01
MKS1Q9NXB0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AL158070.2-201ENST00000623713 1621 ntBASIC14.97□□□□□ -0.01
MKS1Q9NXB0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 POLD2P1-201ENST00000511220 997 ntBASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AL158212.4-201ENST00000624062 1286 ntBASIC14.97□□□□□ -0.01
MKS1Q9NXB0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 KRT8P14-201ENST00000414254 1442 ntBASIC14.97□□□□□ -0.01
MKS1Q9NXB0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MKS1Q9NXB0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.96□□□□□ -0.01
MKS1Q9NXB0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 AC069262.1-201ENST00000539058 672 ntBASIC14.96□□□□□ -0.01
MKS1Q9NXB0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.96□□□□□ -0.01
MKS1Q9NXB0 AL138828.2-201ENST00000615812 383 ntBASIC14.96□□□□□ -0.01
MKS1Q9NXB0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.96□□□□□ -0.01
MKS1Q9NXB0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.96□□□□□ -0.01
MKS1Q9NXB0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms