Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 SCARNA20.5-201ENST00000516991 142 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AP003171.2-201ENST00000528208 925 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AC020914.3-201ENST00000594712 304 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AC073347.1-201ENST00000421633 2643 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 FLJ16779-201ENST00000612722 7638 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AC022532.1-201ENST00000624563 1728 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AC092850.2-201ENST00000623821 2697 ntBASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 DBET-201ENST00000630918 3363 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 AL157414.3-201ENST00000624276 1954 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 CALR4P-201ENST00000431943 946 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 HIST2H2BB-201ENST00000449108 381 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.63■□□□□ 0.41
SH2D4AQ9H788 AP000593.2-201ENST00000542775 1433 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 AC087481.3-201ENST00000602886 1894 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 AC138028.6-201ENST00000616106 1482 ntBASIC17.63■□□□□ 0.41
SH2D4AQ9H788 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 CHMP1AP1-201ENST00000445563 662 ntBASIC17.62■□□□□ 0.41
SH2D4AQ9H788 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AC126915.1-201ENST00000522847 1038 ntBASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 FKBP4P6-201ENST00000457486 1332 ntBASIC17.62■□□□□ 0.41
SH2D4AQ9H788 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AC020658.6-201ENST00000623564 1870 ntBASIC17.62■□□□□ 0.41
SH2D4AQ9H788 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 MST1L-201ENST00000442552 2185 ntBASIC17.62■□□□□ 0.41
SH2D4AQ9H788 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SH2D4AQ9H788 AC013268.4-201ENST00000637413 2228 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms