Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 AC144831.1-201ENST00000573312 2656 ntBASIC17.85■□□□□ 0.45
RNF41Q9H4P4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 ATP5G2P4-201ENST00000442175 420 ntBASIC17.85■□□□□ 0.45
RNF41Q9H4P4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AC078819.1-201ENST00000547454 765 ntBASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AC012085.1-201ENST00000548270 765 ntBASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 ECM1P1-201ENST00000604092 1279 ntBASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 AC023090.2-201ENST00000625182 2110 ntBASIC17.85■□□□□ 0.45
RNF41Q9H4P4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RNF41Q9H4P4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AL590640.2-201ENST00000457038 527 ntBASIC17.84■□□□□ 0.45
RNF41Q9H4P4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 MESTP3-201ENST00000503460 968 ntBASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 SNX29P1-201ENST00000548357 1007 ntBASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms