Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 Y_RNA.89-201ENST00000363031 102 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 RNU6-224P-201ENST00000384055 107 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 MIR568-201ENST00000385036 95 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 MED18-202ENST00000398997 1106 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 FABP5P10-201ENST00000435729 408 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 HNRNPA3P14-201ENST00000444546 1150 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL392103.1-201ENST00000447000 198 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC133965.1-201ENST00000452984 354 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL121877.1-201ENST00000453704 622 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 HSFX4-201ENST00000457775 1184 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC093278.1-201ENST00000494700 600 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC103851.1-201ENST00000506833 274 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC023632.1-201ENST00000518463 375 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC079054.1-201ENST00000523090 331 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC025016.1-201ENST00000616746 682 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL805961.1-201ENST00000642026 753 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 MED6-202ENST00000430055 1507 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AL157791.1-201ENST00000553667 1699 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 AC009237.14-201ENST00000609975 1594 ntBASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 AL357568.2-201ENST00000607752 1517 ntBASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 ZNF669-203ENST00000366501 730 ntTSL 3 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 Y_RNA.578-201ENST00000390903 88 ntBASIC9.79□□□□□ -0.84
KRTAP3-3Q9BYR6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms