Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 FAM86C2P-203ENST00000528684 1004 ntBASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AL031432.2-201ENST00000566714 459 ntBASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AL928711.1-201ENST00000570165 459 ntBASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AP002472.1-201ENST00000577490 586 ntBASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AC004835.2-201ENST00000603762 682 ntBASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 ACTL9-202ENST00000612068 1252 ntBASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 AC134407.3-201ENST00000624035 2139 ntBASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
NDUFAF3Q9BU61 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 AL592424.1-201ENST00000563624 1536 ntBASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 AC092919.2-201ENST00000623631 1645 ntBASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 AC245100.5-201ENST00000452108 331 ntBASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 AC109635.5-201ENST00000533593 962 ntBASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 AC027796.2-201ENST00000575326 344 ntBASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
NDUFAF3Q9BU61 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms