Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 MIR661-201ENST00000384842 89 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AL139094.1-201ENST00000405549 1188 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AC098850.1-201ENST00000419919 790 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AC002472.2-201ENST00000442739 958 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 MYCLP2-201ENST00000449268 967 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AL359711.2-201ENST00000563105 872 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 SPDYE22P-201ENST00000582158 798 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 RN7SL204P-201ENST00000582831 262 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 PRSS30P-206ENST00000641773 873 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC232323.1-201ENST00000540724 2099 ntBASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC236430.1-201ENST00000402231 743 ntBASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC140912.1-201ENST00000577171 1054 ntBASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC133539.2-201ENST00000604757 467 ntBASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MS4A4EQ96PG1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MS4A4EQ96PG1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.17□□□□□ -0.14
MS4A4EQ96PG1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
MS4A4EQ96PG1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MS4A4EQ96PG1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.17□□□□□ -0.14
MS4A4EQ96PG1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MS4A4EQ96PG1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MS4A4EQ96PG1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms