Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 AC004835.2-201ENST00000603762 682 ntBASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 CICP20-201ENST00000443330 2801 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 MST1P2-201ENST00000457982 2291 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AP000344.2-201ENST00000512987 629 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AC190387.1-201ENST00000551683 408 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AC044860.1-202ENST00000559481 777 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AC051619.7-201ENST00000568314 623 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AP001059.3-201ENST00000619053 235 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 AL360270.3-201ENST00000609118 1348 ntBASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.62■□□□□ 0.41
CHAMP1Q96JM3 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AC138761.1-201ENST00000584393 385 ntBASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms