Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AC067863.1-201ENST00000494933 530 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ALG1L8P-201ENST00000533887 760 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AC004449.1-201ENST00000564240 433 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 MIR6069-201ENST00000620069 79 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 LINC00628-201ENST00000628516 1289 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 MTHFR-210ENST00000641407 2387 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 REXO1L4P-201ENST00000605109 1937 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXRED1Q96CU9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 RBPMS2P1-201ENST00000437762 623 ntBASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AC093520.2-201ENST00000561830 333 ntBASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 AP001059.3-201ENST00000619053 235 ntBASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXRED1Q96CU9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms