Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 KRT8P31-201ENST00000504812 1408 ntBASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 TSPY25P-201ENST00000429463 745 ntBASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 ORAOV1P1-201ENST00000503108 395 ntBASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AC027237.1-201ENST00000560942 655 ntBASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 NUDT4P2-201ENST00000578341 546 ntBASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AC133540.1-201ENST00000620845 1019 ntBASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM43Q96BQ3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM43Q96BQ3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.21■□□□□ 0.18
TRIM43Q96BQ3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM43Q96BQ3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM43Q96BQ3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 REXO1L4P-201ENST00000605109 1937 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 XBP1P1-201ENST00000436573 652 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AL354861.1-201ENST00000445213 355 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 ALG3P1-201ENST00000508806 1114 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AP000911.2-201ENST00000534330 502 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 CR383656.3-201ENST00000551315 183 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AP003392.6-201ENST00000607709 325 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 AC003102.2-201ENST00000589195 1469 ntBASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TRIM43Q96BQ3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms