Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC063926.2-201ENST00000623766 1308 ntBASIC15.51■□□□□ 0.07
PTCD2Q8WV60 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 MEP1AP4-201ENST00000423244 1087 ntBASIC15.51■□□□□ 0.07
PTCD2Q8WV60 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 MTND2P39-201ENST00000457230 764 ntBASIC15.51■□□□□ 0.07
PTCD2Q8WV60 TRIM36-IT1-201ENST00000503723 881 ntBASIC15.51■□□□□ 0.07
PTCD2Q8WV60 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 AC005520.3-201ENST00000602874 370 ntBASIC15.51■□□□□ 0.07
PTCD2Q8WV60 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AP006294.1-201ENST00000415407 339 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 BNIP3P35-201ENST00000604530 490 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AC084782.3-201ENST00000612282 578 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AC020763.2-201ENST00000623155 1255 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AL358472.5-202ENST00000641448 1267 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 CU639417.3-201ENST00000624240 1404 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTCD2Q8WV60 AC007292.2-201ENST00000593524 1812 ntBASIC15.5■□□□□ 0.07
PTCD2Q8WV60 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms