Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 AC226150.1-201ENST00000544259 466 ntBASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC9.88□□□□□ -0.83
ALMS1Q8TCU4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 HLA-DPA2-205ENST00000433582 733 ntBASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 AC098934.1-203ENST00000442868 1262 ntBASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 HERC2P11-201ENST00000562845 725 ntBASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 AC100756.2-201ENST00000569537 736 ntBASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 PCDHA14-201ENST00000506751 2298 ntBASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 AC020904.3-201ENST00000624199 442 ntBASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 PRMT1P1-201ENST00000604252 1009 ntBASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 COQ4-204ENST00000608951 781 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC9.87□□□□□ -0.83
ALMS1Q8TCU4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms